Precision fermentation: Overview and challenges

Abstract

In the context of increasing global food demand and growing environmental sustainability pressures, precision fermentation (PF) has emerged as a breakthrough biotechnological approach. This study aims to synthesize and analyze the core scientific principles and practical applications of precision fermentation in the production of food ingredients, while also clarifying the technical, legal, and social challenges that hinder its commercialization. Based on a systematic literature review of scientific publications from 2021 to 2026, the findings indicate that precision fermentation utilizes genetically engineered microorganisms to produce proteins, enzymes, vitamins, and functional compounds with high specificity and significantly lower greenhouse gas emissions compared to traditional livestock systems. However, challenges related to scaling up production, downstream processing costs, microbial strain stability at industrial scale, as well as regulatory barriers and consumer perceptions of GMOs remain key constraints. The study proposes several research directions and policy recommendations to enable the sustainable and responsible development of precision fermentation.
Keywords
recombinant enzymes metabolic engineering precision fermentation synthetic biology genetically modified microorganisms

References

1.
Alagappan, S., Nastasi, J. R., Hoffman, L. C., & Cozzolino, D. (2026). Chemometrics, infrared sensors and precision fermentation - Where are we? Food Reviews International. https://doi.org/10.1080/87559129.2026.2643455
2.
Augustin, M. A., Hartley, C. J., Maloney, G., & Tyndall, S. (2024). Innovation in precision fermentation for food ingredients. Critical Reviews in Food Science and Nutrition, 64(18), 6218-6238. https://doi.org/10.1080/10408398.2023.2166014
3.
Cho, S., Jung, S. Y., Eun, H., & Lee, S. Y. (2025). Precision fermentation for producing food ingredients. Current Opinion in Food Science, 61, 101242. https://doi.org/10.1016/j.cofs.2024.101242
4.
Eastham, J. L., & Leman, A. R. (2024). Precision fermentation for food proteins: ingredient innovations, bioprocess considerations, and outlook—a mini-review. Current Opinion in Food Science, 58, 101194. https://doi.org/10.1016/j.cofs.2024.101194
5.
Manzoki, M. C., Weber, M. Z., Costa, G. S., Fusaro, T., Biagini, G., Penha, R. O., Thomaz-Soccol, V., Karp, S. G., & Soccol, C. R. (2026). Biomass and precision fermentation inputs for cultivated meat: advances, sustainability, food safety, and techno-economic perspectives. Food Research International, 232, 118904. https://doi.org/10.1016/j.foodres.2025.118904
6.
Obayomi, O. V., Malomo, A. A., Olaniran, A. F., Osemwegie, O. O., Olojede, A. O., Beyioku, O. E., & Adeyemi, O. S. (2026). Transition from fermentation to precision fermentation: role in sustainable food system. Biotechnology Reports, 50, e00952. https://doi.org/10.1016/j.btre.2026.e00952
7.
Reis, G. G., Samoggia, A., & Manzoki, M. C. (2026). Infrastructure for sustainable protein innovation: a global value chain framework for CDMOs in fermentation-based biomanufacturing. Foods, 15(8), 1341. https://doi.org/10.3390/foods15081341
8.
Shukla, A. D., Rai, S., Ramachandran, P., Sangeeta, S., Tiwari, A., & Tiwari, A. (2026). Precision fermentation: pioneering the future of sustainable and alternative animal protein production. Applied Food Research, 6, 102015. https://doi.org/10.1016/j.afres.2026.102015
9.
Teng, T. S., Chin, Y. L., Chai, K. F., & Chen, W. N. (2021). Fermentation for future food systems: precision fermentation can complement the scope and applications of traditional fermentation. EMBO Reports, 22(5), e52680. https://doi.org/10.15252/embr.202152680
10.
Verma, K., Duhan, P., Pal, D., Verma, P., & Bansal, P. (2025). Precision fermentation for the next generation of food ingredients: opportunities and challenges. Future Foods, 12, 100750. https://doi.org/10.1016/j.fufo.2025.100750